Job Description P27870 Confidence 98.68% Date Tue Jul 30 13:02:10 BST 2013 Rank 286 Aligned Residues 306 % Identity 12% Template c4h8sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain Resolution 3.50 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		Y	D	K	R	C	C	C	L	R	E	I	Q	Q	T	E	E	K	Y	T	D	T	L	G	S	I	Q	Q	H	F	M	K	P	L	Q	R	F	L	K	P	Q	D	M	E	T	I	F	V	N	.	.	.	.	I	E	E	L	F	S	V	H
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.
Template Conservation
Template Sequence		T	N	Q	L	L	Q	A	M	Q	R	V	Y	G	A	Q	N	E	M	C	L	A	T	Q	Q	L	S	K	Q	L	L	A	Y	E	K	Q	N	F	A	D	E	E	V	I	S	T	L	H	Y	F	S	K	V	V	D	E	L	N	L	L	H
Template Known Secondary structure																															T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		T	H	F	L	K	E	L	K	D	A	L	A	G	P	G	A	T	T	L	Y	Q	V	F	I	K	Y	K	E	R	F	L	V	Y	G	R	Y	C	S	Q	V	E	S	A	S	K	H	L	D	Q	V	A	T	A	R	E	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.
Alig confidence																																																									.	.	.	.	.
Template Conservation
Template Sequence		T	E	L	A	K	Q	L	A	D	T	M	V	L	P	I	I	Q	F	R	E	K	D	L	T	E	V	S	T	L	K	D	L	F	G	L	A	S	N	E	H	D	L	S	M	A	K	Y	S	R	L	P	K	K	K	E	N	E	K	V	K
Template Known Secondary structure												T										T																													S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.																																															.
Query SS confidence		.																																															.
Query Sequence		.	D	V	Q	M	K	L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	.	D	A	T	E	K	E	N	L	R	L	A	L
Query Conservation		.																																															.
Alig confidence		.																															.	.															.
Template Conservation																																	.	.
Template Sequence		T	E	V	G	K	E	V	A	A	A	R	R	K	Q	H	L	S	S	L	Q	Y	Y	C	A	L	N	A	L	Q	Y	R	.	.	K	Q	M	A	M	M	E	P	M	I	G	F	A	H	G	Q	I	N	F	F	K	K	G	A	E	M	F
Template Known Secondary structure																																	.	.																											S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
							361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.													.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	A	M	R	D	L	A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	.	.	.	.	.	.	.	.	.	.	.	.	N	L	D	Q	S	L	A	N	Y	G	R	P
Query Conservation		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	R	M	D	S	F	L	S	S	V	A	D	M	V	Q	S	I	Q	V	E	L	E	A	E	A	E	K	M	R	V	S	Q	Q	E	L	L	S	V	D	E	S	V	Y	T	P	D	S	D	V	A	A	P	Q	I	N	R	N	L	I
Template Known Secondary structure																																								S		T	T	T	T		T	T	S		S	S	S						S		S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.				.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		K	I	D	G	E	L	K	I	T	S	V	.	.	.	E	R	R	S	K	T	D	R	Y	A	F	L	L	D	K	A	L	L	I	C	K	R	R	G	D	S	Y	D	L	K	A	S	V	N	L	H	S	F	Q	V	R	D	D	S	S	G
Query Conservation													.	.	.
Alig confidence													.	.	.																										.	.
Template Conservation																																									.	.
Template Sequence		Q	K	A	G	Y	L	N	L	R	N	K	T	G	L	V	T	T	T	W	E	R	L	Y	F	F	T	Q	G	G	N	L	M	C	Q	P	R	G	A	V	.	.	A	G	G	L	I	Q	D	L	D	N	C	S	V	M	A	V	D	C	E
Template Known Secondary structure														S	S	S													S	S							T	T		S	.	.	S					B		S	S										T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	D	N	K	K	W	S	H	M	F	L	L	I	E	D	Q	G	A	Q	G	Y	E	L	F	F	K	T	R	E	L	K	K	K	W	M	E	Q	F	E	M	A	I	S	N	I
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		D	R	R	.	.	.	.	.	Y	C	F	Q	I	T	T	P	N	G	K	S	G	I	I	L	Q	A	E	S	R	K	E	N	E	E	W	I	C	A	I	N	N	I	S	R	Q	I
Template Known Secondary structure		T		S	.	.	.	.	.	S							T	T	S	S								S	S	S															S
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		337	.	.						340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D