Return to main results Retrieve Phyre Job Id

Job DescriptionP27870
Confidence99.89%DateTue Jul 30 13:02:10 BST 2013
Rank47Aligned Residues153
% Identity25%Templatec3qwxX_
PDB info PDB header:signaling proteinChain: X: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 1-174
Resolution2.01 Å
Model Dimensions (Å)X:50.672 Y:42.123 Z:28.947

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   665....670.........680......... 690.........700.........710... ......
Predicted Secondary structure 
























..





















...


Query SS confidence 
























. .























. . .





Query Sequence  DLSVHLWYAGPMERAGAEGILTNRS. . DGTYLVRQRVKDTAEFAISIKYNV. . . EVKHIK
Query Conservation               
  
        .. 
   

           
     ...      
Alig confidence 
























..








.













...





Template Conservation        

 
 


 


  
       
 



 
.     
 


        


  
Template Sequence  PFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS. SRPGEYSLTVREADEGNAVCHYL
Template Known Secondary structure  GGGGGGGTT

STT

TT
.SSTT


SSSS
Template Predicted Secondary structure 




















.










Template SS confidence 



























































   8.10.........20.........30.........40... ......50.........60......
 
   720..... ....730.........740.........750.........760.........770..
Predicted Secondary structure 





.......














































Query SS confidence 





. . . . . . .














































Query Sequence  IMTSEG. . . . . . . LYRITEKKAFRGLLELVEFYQQNSLKDCFKSLDTTLQFPYKEPERRA
Query Conservation       
.......           
   
       
              
        
Alig confidence 





.......


























....................
Template Conservation 
                     
 

  

  
    
  ....................
Template Sequence  IERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTE. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 



TTSSS


TTSSTTSS
SSS....................
Template Predicted Secondary structure 






















....................
Template SS confidence 



























































   67..70.........80.........90.........100......
 
   773......780.........790.........800.........810.........820..... ....830.
Predicted Secondary structure 






























.

Query SS confidence 




















































.





Query Sequence  ISKPPAGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEI. YGRIGW
Query Conservation                  




 
   




  



 

 
 
  


 

 . 

 
 
Alig confidence 










































.








.





Template Conservation    
             

  
      


   

 
 
    .   

      
  
 
Template Sequence  ASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKT. NQDWWEARNALGTTGL
Template Known Secondary structure 








SSS
B

SSTTB

B
TT


.SSS
TT

Template Predicted Secondary structure 


























.






Template SS confidence 



























































   107..110.........120.........130.........140......... 150.........160.....
 
   832.......
Predicted Secondary structure 




Query SS confidence 







Query Sequence  FPSNYVEE
Query Conservation 





  
Alig confidence 







Template Conservation   
  



Template Sequence  VPANYVQI
Template Known Secondary structure  GGG
Template Predicted Secondary structure 

Template SS confidence 







   166...170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D