Job Description P27870 Confidence 97.06% Date Tue Jul 30 13:02:10 BST 2013 Rank 453 Aligned Residues 81 % Identity 23% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.		.	.	.	.	.	.	.	.	720	.				.	.	.	.
Predicted Secondary structure																																												.											.	.	.
Query SS confidence																																												.											.	.	.
Query Sequence		L	W	Y	A	G	P	M	E	R	A	G	A	E	G	I	L	T	N	R	S	D	G	T	Y	L	V	R	Q	R	V	K	D	T	A	E	F	A	I	S	I	K	Y	.	N	V	E	V	K	H	I	K	I	M	.	.	.	T	S	E	G
Query Conservation																																												.											.	.	.
Alig confidence						.																																						.											.	.	.
Template Conservation						.
Template Sequence		P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G
Template Known Secondary structure		T	T	B		.												T	T	S		T	T									S	T	T											T	T
Template Predicted Secondary structure						.
Template SS confidence
		11	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	I	T	E	K	K	A	F	R	G	L	L	E	L	V	E	F	Y	Q	Q	N	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R
Template Known Secondary structure						S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D