Job Description P27870 Confidence 97.94% Date Tue Jul 30 13:02:10 BST 2013 Rank 326 Aligned Residues 136 % Identity 21% Template c3f7pA_ PDB info PDB header:structural protein/cell adhesion Chain: A: PDB Molecule:plectin-1; PDBTitle: crystal structure of a complex between integrin beta4 and2 plectin Resolution 2.75 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	C	T	H	W	L	I	Q	C	R	V	L	P	P	S	H	R	V	T	W	E	G	A	Q	V	C	E	L	A	Q	A	L	R	D	G	V	L	L	C	Q	L	L	N	N	L	L	P	Q	A	I	N	L	R	E	V	N	L	R	P
Query Conservation
Alig confidence												.	.								.	.	.	.	.	.																														.	.	.	.
Template Conservation												.	.								.	.	.	.	.	.																														.	.	.	.
Template Sequence		K	T	F	T	K	W	V	N	K	H	.	.	L	I	K	A	Q	R	H	.	.	.	.	.	.	I	S	D	L	Y	E	D	L	R	D	G	H	N	L	I	S	L	L	E	V	L	S	G	D	S	L	P	R	E	.	.	.	.	K	G
Template Known Secondary structure												.	.		G	G	G	T			.	.	.	.	.	.		S		T	T	T	T	T	T	T	S																			.	.	.	.
Template Predicted Secondary structure												.	.								.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																								.	.	.	.	.	.	100
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		Q	M	S	Q	F	L	C	L	K	N	I	R	T	F	L	S	T	C	C	E	K	F	G	L	K	R	S	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	A	F	D	L	F	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence			.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation			.																			.
Template Sequence		R	.	M	R	F	H	K	L	Q	N	V	Q	I	A	L	D	Y	L	R	H	.	R	Q	V	K	L	V	N	I	R	N	D	D	I	A	D	G	N	P	K	L	T	L	G	L	I	W	T	I	I	L	H	F	Q	I	S	D	I	Q	V
Template Known Secondary structure		S	.	S																		.	T	T				T	T								T	T																	T	T	T	T
Template Predicted Secondary structure			.																			.
Template SS confidence
		121		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
			101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	V	Q	D	F	G	K	V	I	Y	T	L	S	A	L	S	W	T	P	I	A	Q	N	K	G	I	M	P	F	P	T	E	D	S	A	L	N	D	E	D	I	Y	S	G	L	S	D	Q	I	D	D	T	A	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		S	G	Q	S	E	D	M	T	A	K	E	K	L	L	L	W	S	Q	R	M	V	E	G	Y	Q	G	L	R	C	D	N	F	T	S	S	W	R	D	G	R	L	F	N	A	I	I	H	R	H	K	P	L	L	I	D
Template Known Secondary structure		S	S			T	T	S														T	T	T	S	T	T						S	S	G	G	G	T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D