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Job DescriptionP27870
Confidence98.80%DateTue Jul 30 13:02:10 BST 2013
Rank282Aligned Residues137
% Identity78%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   639640.........650.........660.........670.........680.........690........
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Query Sequence  GRNTATNEVGWFPCNRVHPYVHGPPQDLSVHLWYAGPMERAGAEGILTNRSDGTYLVRQR
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Template Sequence  GSSGSSGKAEAEQNWW. . . . . EGPPQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQR
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S.....


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GGGSSSB

S

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TT

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   1........10...... ...20.........30.........40.........50.....
 
   699700.........710.........720.........730.........740.........750........
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Query Sequence  VKDTAEFAISIKYNVEVKHIKIMTSEGLYRITEKKAFRGLLELVEFYQQNSLKDCFKSLD
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Template Sequence  VKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLD
Template Known Secondary structure  SSTT


TT
TTSSTT

BSSTTS
GGGT
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   56...60.........70.........80.........90.........100.........110.....
 
   759760.........770.........780
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Query Sequence  TTLQFPYKEPERRAISKPPAGS
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Template Sequence  TTLQFPFKEPEKRTISRSGPSS
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   116...120.........130.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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