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Job DescriptionP27870
Confidence99.80%DateTue Jul 30 13:02:10 BST 2013
Rank58Aligned Residues111
% Identity26%Templatec1p5sA_
PDB info PDB header:cytokineChain: A: PDB Molecule:ras gtpase-activating-like protein rng2; PDBTitle: structure and function of the calponin-homology domain of2 an iqgap protein from schizosaccharomyces pombe
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
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Query Sequence  RQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPQAINLREVNLRP
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Template Sequence  DEAKKWIEEC. . . . . . . . LGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLI. . KIFYSN
Template Known Secondary structure  ........TS



GGGTTS
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S
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   45....50.... .....60.........70.........80........ .90....
 
   65....70.........80.........90.........100.........110.........120....
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Query Sequence  QMSQFLCLKNIRTFLSTCCEKFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTPIAQNK
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Template Sequence  E. LQFRHSDNINKFLDFIHG. IGLPEIFHFELTDIYEGKNLPKVIYCIHALSYF. . LSMQ
Template Known Secondary structure  S.S


.TT

GGG


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   95 ....100.........110... ......120.........130.........140...... ...150
 
   125....
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Query Sequence  GIMPF
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Template Sequence  DLAPP
Template Known Secondary structure  TSS

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   151....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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