Job Description P27870 Confidence 100.00% Date Tue Jul 30 13:02:10 BST 2013 Rank 24 Aligned Residues 286 % Identity 20% Template c1ntyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:triple functional domain protein; PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a Resolution 1.70 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		K	R	C	C	C	L	R	E	I	Q	Q	T	E	E	K	Y	T	D	T	L	G	S	I	Q	Q	H	F	M	K	P	L	Q	R	.	.	.	.	.	.	F	L	K	P	Q	D	M	E	T	I	F	V	N	I	E	E	L	F	S	V	H
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	E	F	I	M	A	E	L	I	Q	T	E	K	A	Y	V	R	D	L	R	E	C	M	D	T	Y	L	W	E	M	T	S	G	V	E	E	I	P	P	G	I	V	N	K	E	L	I	I	F	G	N	M	Q	E	I	Y	E	F	H
Template Known Secondary structure																																					S				T	T	T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	F	L	K	E	L	K	D	A	L	A	G	P	G	A	T	T	L	Y	Q	V	F	I	K	Y	K	E	R	F	L	V	Y	G	R	Y	C	S	Q	V	E	S	A	S	K	H	L	D	Q	V	A	T	A	R	E	D	V	Q	M	K
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		N	N	I	F	L	K	E	L	E	K	Y	E	Q	.	L	P	E	D	V	G	H	C	F	V	T	W	A	D	K	F	Q	M	Y	V	T	Y	C	K	N	K	P	D	S	T	Q	L	I	L	E	H	A	G	S	Y	F	D	E	I	Q	Q
Template Known Secondary structure				T								T	T	T	.		G	G	G	T							T	T	T	T	T																					T	T	T
Template Predicted Secondary structure															.
Template SS confidence
		1293	.	.	.	.	.	.	1300	.	.	.	.	.		.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	.	D	A	T	E	K	E	N	L	R	L	A	L	D	A	M	R	D	L
Query Conservation																																											.
Alig confidence				.	.	.	.	.	.	.																																	.					.	.	.
Template Conservation				.	.	.	.	.	.	.																																						.	.	.
Template Sequence		R	H	.	.	.	.	.	.	.	G	L	A	N	S	I	S	S	Y	L	I	K	P	V	Q	R	I	T	K	Y	Q	L	L	L	K	E	L	L	T	C	C	E	E	G	K	G	E	.	.	.	I	K	D	G	L	E	V	M	L	S	V
Template Known Secondary structure				.	.	.	.	.	.	.	T		S	S							T																			T	S		T	T		T	T	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
		1352	.								.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390				.	.	.	.	.	.	.	.	.	1400	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	N	L	D	Q	S	L	A	N	Y	G	R	P	K	I	D	G	E	L	K	I	T	S	V	E	R	R	S	K	T	.	.	D	R	Y	A
Query Conservation																																																								.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	R	A	N	D	A	M	H	L	S	M	.	.	.	.	.	.	.	.	.	.	.	L	E	G	F	D	E	N	I	E	S	Q	G	E	L	I	L	Q	E	S	F	Q	V	W	D	P	K	T	L	I	R	K	G	R	E	R	H	L
Template Known Secondary structure												T	T	.	.	.	.	.	.	.	.	.	.	.			S			S		S	G	G	G														S	S	S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1402	.	.	.	.	.	.	.	1410	.	.	.												.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440						.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																					.	.	.
Query SS confidence																		.	.	.	.	.																																					.	.	.
Query Sequence		F	L	L	D	K	A	L	L	I	C	K	R	R	G	D	S	.	.	.	.	.	Y	D	L	K	A	S	V	N	L	H	S	F	Q	V	R	D	D	S	S	G	E	R	D	N	K	K	W	S	H	M	F	L	L	I	E	D	.	.	.
Query Conservation																		.	.	.	.	.																																					.	.	.
Alig confidence																		.	.	.	.	.																						.	.	.	.	.	.										.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		F	L	F	E	M	S	L	V	F	S	K	E	V	K	D	S	S	G	R	S	K	Y	L	Y	K	S	K	L	F	T	S	E	L	G	V	T	E	H	V	E	G	D	.	.	.	.	.	.	P	C	K	F	A	L	W	V	G	R	T	P
Template Known Secondary structure					S	S											T	T													G	G	G								T	T		.	.	.	.	.	.	T	T							S	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		1451	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.							.	.	.	.	.	.	.	1500	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	Q	G	Y	E	L	F	F	K	T	R	E	L	K	K	K	W	M	E	Q	F	E	M	A	I	S	N	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	D	N	K	I	V	L	K	A	S	S	I	E	N	K	Q	D	W	I	K	H	I	R	E	V	I	Q	E	R	T
Template Known Secondary structure			T	T	T							S	S																		T
Template Predicted Secondary structure
Template SS confidence
		1505	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D