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Job DescriptionP27870
Confidence97.77%DateTue Jul 30 13:02:10 BST 2013
Rank353Aligned Residues137
% Identity16%Templatec1dxxB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:dystrophin; PDBTitle: n-terminal actin-binding domain of human dystrophin
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
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Query Sequence  RQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPQAINLREVNLRP
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Template Sequence  KTFTKWVNAQ. . . . . . . FSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKL. . . . PKEKG
Template Known Secondary structure  .......TT



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   1920........ .30.........40.........50.........60.. .....
 
   65....70.........80.........90... ......100
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Query Sequence  QMSQFLCLKNIRTFLSTCCEKFGLKRSEL. . . . . . . . . . . . . . . . . . . . . . . FEAFDLF.
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Template Sequence  S. TRVHALNNVNKALRVLQ. NNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMK
Template Known Secondary structure  S.S.TT


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   68 .70.........80..... ....90.........100.........110.........120.....
 
   101........110.........120.........130.........140.........150....
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Query Sequence  . . . DVQDFGKVIYTLSALSWTPIAQNKGIMPFPTEDSALNDEDIYSGLSDQIDDTAE
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Template Sequence  NIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFD
Template Known Secondary structure  TT

TT
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SSSGGGTTS
GGGS
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   126...130.........140.........150.........160.........170.........180..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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