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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank105Aligned Residues247
% Identity41%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.... .....220.... .....230........
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Query Sequence  RPREEFTLCKKLGAGYFGEVFEALWKGQV. . . . HVAVKVISRD. . . NLLHQHTFQAEIQA
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
Template Known Secondary structure 

GGG



B

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S
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   121........130.........140.........150.........160.........170.........180
 
   239240.........250.........260.........270.........280.........290........
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Query Sequence  MKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAE
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Template Sequence  MHSLDHRNLIRLYGVVLTPP. MKMVTELAPLGSLLDRLRKHQGH. FLLGTLSRYAVQVAE
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   181........190.........200 .........210.........220... ......230........
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  GMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEA
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Template Sequence  GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA. . . . . . . . . . LPVPFAWCAPES
Template Known Secondary structure  TT


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SGGGSSSS


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   239240.........250.........260.........270...... ...280........
 
   359360.........370.........380.........390.........400 .........410.......
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Query Sequence  LSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRV. DAGYRMPCPLECPPNIH
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Template Sequence  LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
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   302.......310.........320.........330.........340.........350.........360.
 
   418.420.........430.........440....
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Query Sequence  KLMLSCWSRDPKQRPCFKDLCEKLTGI
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Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEA
Template Known Secondary structure  T
SSGGGS

T
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   362.......370.........380........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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