Job Description Q64434 Confidence 100.00% Date Wed Jul 10 14:13:37 BST 2013 Rank 130 Aligned Residues 229 % Identity 28% Template c4g3dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik) Resolution 2.90 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	R	P	R	E	E	F	T	L	C	K	K	L	G	A	G	Y	F	G	E	V	F	E	A	L	W	K	.	G	Q	V	H	V	A	V	K	V	I	S	R	D	N	L	L	H	Q	H	T	F	Q	A	E	I	Q	A	M	K	K	L	R
Query Conservation																													.
Alig confidence																													.																		.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		D	Y	E	Y	R	E	E	V	H	W	A	T	H	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	.	E	E	L	M	A	C	A	G	L	T
Template Known Secondary structure		T	T	B			B	T	T	T							S	S	S	S								T	T	T											T	T	T			T	.	.	.	.	.					T	T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.						.	.	.	.	.	440	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	H	I	L	S	L	Y	A	V	A	T	A	G	D	P	V	Y	I	I	T	E	L	M	P	K	G	N	L	L	Q	L	L	R	D	S	D	E	K	A	L	P	I	L	E	L	V	D	F	A	S	Q	V	A	E	G	M	C	Y	L
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		S	P	R	I	V	P	L	Y	G	A	V	R	E	G	P	W	V	N	I	F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	.	.	G	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L
Template Known Secondary structure			T	T	B										T	T										T	T		B								S	.	.	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	T	E	N	.	N	L	C	K	V	G	D	F	G	L	A	R	L	V	K	E	D	I	Y	L	S	H	E	H	N	V	P	Y	K	W	T	A	P	E	A	L	S	R	G
Query Conservation																						.
Alig confidence																						.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	P	G	T	T	.	.	.	.	.	.	.	.	.	.	H	M	A	P	E	V	V	L	G	R
Template Known Secondary structure				T	T								G	G	G					S	S	S									T	T										.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.											.	.	.	550	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	S	I	K	S	D	V	W	S	F	G	V	L	L	H	E	I	F	S	R	G	Q	M	P	Y	P	G	M	S	N	H	E	T	F	L	R	V	D	A	G	Y	R	M	P	C	P	L	E	C	P	P	N	I	H	K	L	M	L	S
Query Conservation
Alig confidence																						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	C	D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L	N	.	G	C	H	P	P	P	V	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q	E
Template Known Secondary structure					T																	.	S	S				G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.	.	.	.	600																.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	S	R	D	P	K	Q	R	P	C	F	K	D	L	C	E	K	L	T	G	I	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R	A	L	Q
Template Known Secondary structure			T		S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D