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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank217Aligned Residues233
% Identity28%Templatec4g34A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crystal structure of gsk6924 bound to perk (r587-r1092, delete a660-2 t867) at 2.70 a resolution
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210. ........220.. .......230.........240......
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVIS. RDNLLHQHTFQAEIQAMKKLRHKH
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Template Sequence  TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG
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   590.........600.........610.........620.........630.........640.........
 
   247..250........ .260.........270......... 280.........290.........300...
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Query Sequence  ILSLYAVATAGD. . PVYIITELMPKGNLLQLLRDS. DEKALPILELVDFASQVAEGMCYL
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Template Sequence  IVRYFNAWLEKNKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL
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   650.........660.........670.........680.........690.........700.........
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  ESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGH
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Template Sequence  HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLG. . . . . . . . . . . . . . . TKLYMSPEQIHGNS
Template Known Secondary structure  TT






GGG
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   928.930.........940.........950........ .960.........970..
 
   364.....370.........380.........390.........400.........410.........420...
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Query Sequence  YSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLMLSC
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Template Sequence  YSHKVDIFSLGLILFELLY. P. . FSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDM
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   1000.........1010........ . 1020.........1030.........1040.........1050......
 
   424.....430.........
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Query Sequence  WSRDPKQRPCFKDLCE
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Template Sequence  LSPSPMERPEAINIIE
Template Known Secondary structure  T
SSGGGS

T
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   1057..1060.........1070..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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