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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank134Aligned Residues253
% Identity29%Templatec4f1oA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:serine/threonine-protein kinase roco4; PDBTitle: crystal structure of the l1180t mutant roco4 kinase domain from d.2 discoideum bound to appcp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210 .........220........ .230......
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Query Sequence  ERPREEFTLCKKLGAGYFGEVFEALW. KGQVHVAVKVISRDNLLH. . . . . . . QHTFQAEI
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Template Sequence  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV
Template Known Secondary structure  B

TTT



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TTGGGG
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   1020.........1030.........1040.........1050.........1060.........1070.........
 
   237..240.........250.........260.........270.........280.........290......
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Query Sequence  QAMKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQV
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Template Sequence  FIMSNLNHPNIVKLYGLMH. . NPPRMVMEFVPCGDLYHRLLDKAHP. IKWSVKLRLMLDI
Template Known Secondary structure  TT


TTB

T..TTT

TT
BT
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   1080.........1090........ .1100.........1110.........1120... ......1130......
 
   297..300....... ..310.........320.. .......330.........340.........
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Query Sequence  AEGMCYLESQN. . YIHRDLAARNVLVTE. . . . . NNLCKVGDFGLARLVKEDIYLSHEHNV
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Template Sequence  ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN. .
Template Known Secondary structure  TSSS

B
S

SGGGS


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TT
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   1137..1140.........1150.........1160.........1170.........1180.........1190....
 
   350.........360 .........370.........380.........390...... ...400....
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Query Sequence  PYKWTAPEALS. . RGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHET. . . FLRVDAGY
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Template Sequence  . FQWMAPETIGAEEESYTEKADTYSFAMILYTILT. GEGPFDEYSYGKIKFINMIREEGL
Template Known Secondary structure  .TTTS
S
TTS
T.SS
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   1195....1200.........1210.........1220........ .1230.........1240.........1250..
 
   405....410.........420.........430.........440....
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Query Sequence  RMPCPLECPPNIHKLMLSCWSRDPKQRPCFKDLCEKLTGI
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Template Sequence  RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL
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TTS
T
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T
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   1253......1260.........1270.........1280.........1290..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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