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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank120Aligned Residues239
% Identity22%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210 .........220........ .230.........240....
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Query Sequence  EEFTLCKKLGAGYFGEVFEALW. KGQVHVAVKVISRDNLLH. . . QHTFQAEIQAMKKLRH
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Template Sequence  ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH
Template Known Secondary structure  TTTTTTT



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   8.10.........20.........30.........40.........50.........60.......
 
   245....250.........260.........270.........280.........290.........300....
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Query Sequence  KHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLE
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Template Sequence  QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH. . GPLSVDTAINFTNQILDGIKHAH
Template Known Secondary structure  TTB



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   68.70.........80.........90.........100.. .......110.........120.....
 
   305....310.........320.........330.........340.........350.........360....
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Query Sequence  SQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHY
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Template Sequence  DMRIVHRDIKPQNILIDSNKTLKIFDFGIAK. . . . . . . . . . . . . . TVQYFSPEQAKGEAT
Template Known Secondary structure  TT






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   126...130.........140.........150...... ...160.........170.
 
   365....370.........380.........390.........400....... ..410.........420
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Query Sequence  SIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMP. . . . CPLECPPNIHKLM
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Template Sequence  DECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI
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   187..190.........200.... .....210.........220.........230.........240.....
 
   421........430. ........440....
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Query Sequence  LSCWSRDPKQR. PCFKDLCEKLTGI
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Template Sequence  LRATEKDKANRYKTIQEMKDDLSSV
Template Known Secondary structure  T
SSTTTS
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   246...250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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