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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank164Aligned Residues250
% Identity22%Templatec4dc2A_
PDB info PDB header:transferase/transferase substrateChain: A: PDB Molecule:protein kinase c iota type; PDBTitle: structure of pkc in complex with a substrate peptide from par-3
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210. ........220.........230.........240.. .
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Query Sequence  RPREEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLHQHTFQAEIQAMKKL. R
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVV. KKELVNIDWVQTEKHVFEQASN
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GGG
SSTTTT.GGGT


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   239240.........250.........260.........270..... ....280.........290.......
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  HKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYL
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Template Sequence  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLALNYL
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   302.......310.........320.........330....... ..340.........350.........
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  ESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGH
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Template Sequence  HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED
Template Known Secondary structure  TT
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GGG
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GGG

TT

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   360.........370.........380.........390.........400.........410.........
 
   364.....370.........380.........390.. .......400.........410.........420.
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Query Sequence  YSIKSDVWSFGVLLHEIFSRGQMPYPGMS. . NHETFLRVDAGYRMPCPLECPPNIHKLML
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Template Sequence  YGFSVDWWALGVLMFEMMA. GRSPFDIVGSNTEDYLFQVILEKQIRIPRSLSVKAASVLK
Template Known Secondary structure  B
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   420.........430........ .440.........450.........460.........470........
 
   422.......430.. .......
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Query Sequence  SCWSRDPKQRP. . . . . . CFKDLCE
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Template Sequence  SFLNKDPKERLGCHPQTGFADIQG
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TTTSTT
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   485....490.........500........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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