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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank202Aligned Residues243
% Identity11%Templatec3vwaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191..... ...200.........210. ........220.........230.........240........
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Query Sequence  FTLCKK. LGAGYFGEVFEALWK. GQVHVAVKVISRDNLLHQHTFQAEIQAMKKLRHKHIL
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Template Sequence  YTIEETAITETALWQCFDGTRKADSLPVTVFKA. KRSPENESLILNAVHKSKILKIPGLC
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   17..20.........30.........40......... 50.........60.........70.....
 
   249250..... ....260.........270.........280.........290.........300.......
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Query Sequence  SLYAVAT. AGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQN
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Template Sequence  TVLETFDSDPQSTFIVTERVVPFPWDNLGSLS. . . . QNKFGVELGISQLLATLGFLK. . N
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GGGT....T
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   76...80.........90.........100....... ..110.........120........ .
 
   308.310.........320.........330.........340.........350.........360.......
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Query Sequence  YIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHYSIK
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Template Sequence  FVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNT
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   130.........140.........150.........160.........170.........180.........
 
   368.370.........380.........390.........400...... ...410.......
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Query Sequence  SDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRM. . . . . . . . . . PCPLECPPNIH
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Template Sequence  IDSXGLGLLIKSLXA. PSCLPKDWIVNVNXISDGKITIENFRKRLENTETWRSNPLINFY
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GGGTT
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   190.........200.... .....210.........220.........230.........240........
 
   418.420.........430.........440.
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Query Sequence  KLMLSCWSRDPKQRPCFKDLCEKL
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Template Sequence  QELRELHIKDPQGKLVVXSNLENL
Template Known Secondary structure  TGGGS
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   249250.........260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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