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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank54Aligned Residues239
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210 .........220.........230.........240.........250.
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Query Sequence  LCKKLGAGYFGEVFEALW. KGQVHVAVKVISRDNLLHQHTFQAEIQAMKKLRHKHILSLY
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Template Sequence  YFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . . HEEIYNEISLLKSLDHPNIIKLF
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   57..60.........70.........80.........90 .........100.........110...
 
   252.......260.........270.........280.........290.........300.........310.
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Query Sequence  AVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQNYIHR
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Template Sequence  DVFEDKKYFYLVTEFYEGGELFEQIINRHK. . FDECDAANIMKQILSGICYLHKHNIVHR
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   132.......140.........150.........160. ........170.........180.........
 
   312.......320 .........330.........340.........350.........360........
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Query Sequence  DLAARNVLV. . . TENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHYSIKS
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Template Sequence  DIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG. TAYYIAPEVL. KKKYNEKC
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SGGGSSTT

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   190.........200.........210.........220......... 230......... 240.......
 
   369370.........380.........390.........400.........410 .........420.....
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Query Sequence  DVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPL. . . ECPPNIHKLMLSCWS
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Template Sequence  DVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLT
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   248.250.........260. ........270.........280.........290.........300......
 
   426...430.........
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Query Sequence  RDPKQRPCFKDLCE
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Template Sequence  YDYNKRCTAEEALN
Template Known Secondary structure  SSTTTS

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   307..310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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