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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank23Aligned Residues256
% Identity23%Templatec3nyoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein-coupled receptor kinase 6 in complex2 with amp
Resolution2.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210. ........220... ......230.......
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Query Sequence  DDWERPREEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISR. . . DNLLHQHTFQAEIQ
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ
Template Known Secondary structure  TS


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   177..180.........190.........200.........210.........220.........230......
 
   238.240.........250.........260.........270.........280.........290.......
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Query Sequence  AMKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVA
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Template Sequence  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC
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   237..240.........250.........260.........270.........280.........290......
 
   298.300.........310.........320.........330.........340.........350.......
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Query Sequence  EGMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPE
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Template Sequence  CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG. TVGYMAPE
Template Known Secondary structure  TT




GGG
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TT

B



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   297..300.........310.........320.........330.........340....... ..350.....
 
   358.360.........370.........380.........390.........400.........410.......
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Query Sequence  ALSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIH
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Template Sequence  VVKNERYTFSPDWWALGCLLYEMIA. GQSPFQKKIKREEVERLVKEVPEEYSERFSPQAR
Template Known Secondary structure  TT

BSST.SS
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   356...360.........370.........380 .........390.........400.........410....
 
   418.420.........430. ........
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Query Sequence  KLMLSCWSRDPKQR. . . . . PCFKDLCE
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Template Sequence  SLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
S
GGGSTTTTTTT
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   418.420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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