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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank223Aligned Residues241
% Identity20%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210. ........220........ .230.........240... ...
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Query Sequence  FTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLH. . QHTFQAEIQAMKKLR. HKH
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Template Sequence  ILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR
Template Known Secondary structure 
SSTTT

STT
TTT
TT
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   33......40.........50.........60.........70.........80.........90..
 
   247..250.........260.........270.........280.........290.........300......
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Query Sequence  ILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQ
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Template Sequence  VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN
Template Known Secondary structure  B


SS

TTGGGGGSGGG
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T
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   93......100.........110.........120.........130.........140.........150..
 
   307..310.........320.........330.........340.........350.........360......
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Query Sequence  NYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHYSI
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Template Sequence  NIVHLDLKPQNILL. . . . . . . SSIYPLGDIKIVDFGMSRKIMGTPEYLAPEILNYDPITT
Template Known Secondary structure  T
B




GGG.......S
BTTB




TT
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SGGG

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T
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   153......160...... ...170.........180.........190.........200.....
 
   367..370.........380.........390.........400......... 410.........420...
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Query Sequence  KSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCP. . . LECPPNIHKLMLSC
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Template Sequence  ATDMWNIGIIAYMLLT. HTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL
Template Known Secondary structure  .SS
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   215....220.........230 .........240.........250.........260.........270...
 
   424.....430.........
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Query Sequence  WSRDPKQRPCFKDLCE
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Template Sequence  LVKNPEKRPTAEICLS
Template Known Secondary structure  S
SSGGGS

T
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   274.....280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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