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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank143Aligned Residues230
% Identity29%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210. ........220........ .230.........240......
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLH. QHTFQAEIQAMKKLRHKH
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Template Sequence  DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN
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   133......140.........150.........160.........170.........180.........190..
 
   247..250.........260.........270........ .280.........290.........300....
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Query Sequence  ILSLYAVATAGDPVYIITELMPKGNLLQLLRD. . SDEKALPILELVDFASQVAEGMCYLE
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Template Sequence  IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH
Template Known Secondary structure  B


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   193......200.........210.........220.........230.........240.........250..
 
   305....310.........320.. .......330.........340.........350.........360.
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Query Sequence  SQNYIHRDLAARNVLVTE. . . NNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSR
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Template Sequence  SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . . . . . . . . . LFKALYMAPEVFK.
Template Known Secondary structure  TT


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GGGSSSSTT






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GGGGG.
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   253......260.........270.........280...... ...290.........
 
   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  GHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLML
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Template Sequence  RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKATY. . . . . . . KPLTPQAVDLLK
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   311........320.........330. ........340.........350 .........360..
 
   422.......430.........
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Query Sequence  SCWSRDPKQRPCFKDLCE
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Template Sequence  QMLTKDPERRPSAAQVLH
Template Known Secondary structure  T
SSTTSS

T
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   372.......380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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