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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank181Aligned Residues239
% Identity29%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210. ........220........ .230.........240......
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLH. QHTFQAEIQAMKKLRHKH
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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B


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   74.....80.........90.........100.........110.........120.........130...
 
   247..250.........260.........270.........280.........290.........300......
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Query Sequence  ILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQ
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR. . KRFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160....... ..170.........180.........190..
 
   307..310.........320 .........330.........340.........350.........360...
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Query Sequence  NYIHRDLAARNVLV. . . TENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGH
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT. . . . . . . . . TAYYIAPEVLRGT
Template Known Secondary structure  T


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GGG

GGGGGT
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   193......200.........210.........220.........230 .........240...
 
   364.....370.........380.........390.........400.... .....410.........420
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Query Sequence  YSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGY. . . RMPCPLECPPNIHKLM
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Template Sequence  YDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
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   251........260......... 270.........280.........290.........300.........
 
   421........430.........
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Query Sequence  LSCWSRDPKQRPCFKDLCE
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Template Sequence  RKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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