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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank97Aligned Residues238
% Identity26%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210. ........220........ .230.........240....
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLH. . . QHTFQAEIQAMKKLRH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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   74.....80.........90.........100.........110.........120.........130...
 
   245....250.........260.........270.........280.........290.........300....
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Query Sequence  KHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLE
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR. . QKFSEVDAAVIMKQVLSGTTYLH
Template Known Secondary structure  TTB


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   134.....140.........150.........160........ .170.........180.........190.
 
   305....310.........320 .........330.........340.........350.........360.
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Query Sequence  SQNYIHRDLAARNVLV. . . TENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSR
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Template Sequence  KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF. . . . . . . . . . EVGTAYYIAPEVLR
Template Known Secondary structure  TT


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GGGSSS
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   192.......200.........210.........220....... ..230.........240.
 
   362.......370.........380.........390.........400.... .....410........
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Query Sequence  GHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGY. . . RMPCPLECPPNIHK
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Template Sequence  KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ
Template Known Secondary structure  T


T.SS
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   250.........260.........270 .........280.........290.........300........
 
   419420.........430.........
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Query Sequence  LMLSCWSRDPKQRPCFKDLCE
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Template Sequence  LVKLMLTYEPSKRISAEEALN
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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