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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank33Aligned Residues253
% Identity24%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210. ........220........ .230.........240
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Query Sequence  ERPREEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLH. . . QHTFQAEIQAMK
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA
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GGG
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   181........190.........200.........210.........220.........230.........240
 
   241........250.........260.........270........ .280.........290........
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Query Sequence  KLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRD. . SDEKALPILELVDFASQVAE
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Template Sequence  KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS
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   241........250.........260.........270.........280.........290.........300
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  GMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEA
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Template Sequence  GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL
Template Known Secondary structure  TT




GGG
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   301........310.........320.........330.........340.........350.........360
 
   359360.........370.........380.........390. ........400.........410....
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Query Sequence  LSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGM. . . . SNHETFLRVDAGYRMPCPLECPP
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Template Sequence  LLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKFSP
Template Known Secondary structure  TT

B
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   361........370.........380.... .....390.........400......... 410........
 
   415....420.........430. ........
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Query Sequence  NIHKLMLSCWSRDPKQR. . . . . PCFKDLCE
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Template Sequence  ASKDFCEALLQKDPEKRLGFRDGSCDGLRT
Template Known Secondary structure  S
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BTTBSTTGGG
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   419420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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