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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank141Aligned Residues253
% Identity23%Templatec3c0hB_
PDB info PDB header:transferaseChain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210. ........220.. .......230.........
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Query Sequence  RPREEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVIS. . . . . RDNLLHQHTFQAEIQAM
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Template Sequence  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC
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   7..10.........20.........30.........40.........50.........60......
 
   240.........250.........260.........270........ .280.........290.......
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Query Sequence  KKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRD. . SDEKALPILELVDFASQVA
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Template Sequence  HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL
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   67..70.........80.........90.........100.........110.........120......
 
   298.300.........310.........320. ........330.........340.........350....
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Query Sequence  EGMCYLESQNYIHRDLAARNVLVT. . . ENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWT
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Template Sequence  EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM
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GGGSSSSTT




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   127..130.........140.........150.........160.........170.........180......
 
   355....360.........370.........380.........390.........400....... ..410..
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Query Sequence  APEALSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMP. . CPLEC
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Template Sequence  APEVVKREPYGKPVDVWGCGVILFILLS. GCLPFYGTKERLFEGIIKGKYKMNPRQWSHI
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   187..190.........200.........210.... .....220.........230.........240.....
 
   413......420.........430.........
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Query Sequence  PPNIHKLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  SESAKDLVRRMLMLDPAERITVYEALN
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   246...250.........260.........270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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