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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank171Aligned Residues243
% Identity23%Templatec2zmcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human mitotic checkpoint kinase mps1 catalytic2 domain apo form
Resolution3.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.. .......230.........240..
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Query Sequence  ERPREEFTLCKKLGAGYFGEVFEALWKGQVHVAVKVIS. . RDNLLHQHTFQAEIQAMKKL
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL
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   519520.........530.........540.........550.........560.........570........
 
   243 ......250.........260.........270.........280.........290.........300
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Query Sequence  R. . HKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGM
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Template Sequence  QQHSDKIIRLYDYEITDQYIYMVMECG. NIDLNSWLKKK. . KSIDPWERKSYWKNMLEAV
Template Known Secondary structure  GGG
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   579580.........590.........600..... ....610...... ...620.........630.....
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  CYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALS
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Template Sequence  HTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIANQMDSQ. . . . . . . VGTVNYMPPEAIK
Template Known Secondary structure  TT






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   636...640.........650...... ...660.........670.... .....680.......
 
   361 ........370.........380.........390... ......400.........410.......
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Query Sequence  R. GHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSN. . HETFLRVDAGYRMPCPLECPPNIH
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Template Sequence  DMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ
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   697..700.........710......... 720.........730.........740.........750.....
 
   418.420.........430.........
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Query Sequence  KLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  DVLKCCLKRDPKQRISIPELLA
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   766...770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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