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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank203Aligned Residues244
% Identity26%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210..... ....220.........230.........240. .....
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWKGQVH. VAVKVISRDNLLHQHTFQAEIQAMKK. LRHKH
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR. . . . DPTEEIEILLRYGQHPN
Template Known Secondary structure  TT
SSTTTTTTT
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TTTSTT
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   420.........430.........440.........450........ .460.........470.....
 
   247..250.........260.........270.........280.........290.........300......
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Query Sequence  ILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQ
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Template Sequence  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQ. . KFFSEREASAVLFTITKTVEYLHAQ
Template Known Secondary structure  B


SS


S
BT
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T
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   476...480.........490.........500........ .510.........520.........530...
 
   307..310.........320.... .....330.........340.........350.........360..
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Query Sequence  NYIHRDLAARNVLVTENN. . . . LCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRG
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Template Sequence  GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ
Template Known Secondary structure  T
S


GGGSSSS

GGG


TT

B
TTS
B

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S


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   534.....540.........550.........560.........570.........580.........590...
 
   363......370.........380.........390. ........400........ .410......
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Query Sequence  HYSIKSDVWSFGVLLHEIFSRGQMPYPGM. . . SNHETFLRVDAGYRMPC. . . PLECPPNI
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Template Sequence  GYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA
Template Known Secondary structure  .SS
SS
SSTTS
T



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   594.....600.........610... ......620.........630.........640.........650..
 
   417..420.........430.........
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Query Sequence  HKLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  KDLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  S
SSTTTS

T
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   653......660.........670.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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