Return to main results Retrieve Phyre Job Id

Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank297Aligned Residues229
% Identity27%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250..
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  LCKKLGAGYFGEVFEALWKGQVHVAVKVISRDNLLHQHTFQAEIQAMKKLRHKHILSLYA
Query Conservation      

 
 

 
          



 
          
  
  

  
 
 


 
 
Alig confidence 



















.








........





















Template Conservation 
 
 

 



 

     
.  



 
 ........    
  

  
 




    
Template Sequence  MEKYLEKVGEGVVYKAKDSQ. RIVALKRIS. . . . . . . . TAIREISLLKELHHPNIVSLID
Template Known Secondary structure  S
B


B







.


........


TTB

Template Predicted Secondary structure 






.........




Template SS confidence 



























































   20.........30......... 40........ .50.........60.........70
 
   253......260.........270.........280.........290.........300.........310..
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  VATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQNYIHRD
Query Conservation           

 
    
 
   
       
           

 

 


    



Alig confidence 






.


















..






























Template Conservation         .  
        
       ..                  
            
Template Sequence  VIHSECL. TLVFEFMEKDLKKVLDENK. . TGLQDSQIKIYLYQLLRGVAHCHQHRILHRD
Template Known Secondary structure 


.

S
T..T


TT


Template Predicted Secondary structure 






.









..











Template SS confidence 



























































   87..90... ......100.........110.. .......120.........130.........140...
 
   313......320.........330.........340.........350.........360.........370..
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  LAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHYSIKSDVWS
Query Conservation 

  


       

 




                    


       
 





Alig confidence 







.
























....





















Template Conservation          .                         ....                      
Template Sequence  LKPQNLLI. NSDALKLADFGLARAFGIPVRVVTL. . . . WYRAPDVLMGSKKYSTSVDIWS
Template Known Secondary structure 

GGG.






TT
TTS






....TT

TT




T
Template Predicted Secondary structure 







.
















....





















Template SS confidence 



























































   145....150.. .......160.........170....... ..180.........190.........
 
   373......380.........390.........400.........
Predicted Secondary structure 

















.......................
Query SS confidence 




































. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  FGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCP. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 


 
 

 
 
  
            
  
 
   
.......................
Alig confidence 









.

























.......................
Template Conservation   
    
   .                
                                
Template Sequence  IGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK
Template Known Secondary structure  .SS
S


SSGGG



TTT
TTGGGSS






B
Template Predicted Secondary structure  .





















Template SS confidence 



























































   206...210..... ....220.........230.........240.........250.........260....
 
   410.........420.........430.........
Predicted Secondary structure  ......










Query SS confidence  . . . . . .





























Query Sequence  . . . . . . LECPPNIHKLMLSCWSRDPKQRPCFKDLCE
Query Conservation  ......   
  
  

  
   

  


   
  
Alig confidence  ......





























Template Conservation           
    


   
  

  


  


 
Template Sequence  PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure 
STT

S
S
TTTS

T
Template Predicted Secondary structure 











Template SS confidence 



































   265....270.........280.........290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D