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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank215Aligned Residues228
% Identity24%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200. ........210. ........220.........230.........240.. .....
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Query Sequence  FTLCKKLGAGY. FGEVFEALWK. GQVHVAVKVISRDNLLHQHTFQAEIQAMKKL. RHKHI
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Template Sequence  VKSGLQIKKNAIIDDVLQIFNKRTQEKFALKMLQDC. . . . . PKARREVELHWRASQCPHI
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   48.50.........60.........70.........80... ......90.........100..
 
   248.250...... ...260.........270.........280.........290.........300...
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Query Sequence  LSLYAVATA. . . . GDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYL
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Template Sequence  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL
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TT


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   118.120.........130.........140.........150.........160.........170.......
 
   304.....310.........320.. .......330.........340.........350.........360
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Query Sequence  ESQNYIHRDLAARNVLVTE. . . NNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALS
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Template Sequence  HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY. TPYYVAPEVLG
Template Known Secondary structure  TT




GGGSSSSTT




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   178.180.........190.........200.........210.........220..... ....230......
 
   361........370.........380.........390.........400.........410.........420
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Query Sequence  RGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLM
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Template Sequence  PEKYDKSCDMWSLGVIMYILLC. GYPPFYE. . . . . . . . . . . . . FPNPEWSEVSEEVKMLI
Template Known Secondary structure  SST.SS




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   237..240.........250........ .260..... ....270.........280..
 
   421........430........
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Query Sequence  LSCWSRDPKQRPCFKDLC
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Template Sequence  RNLLKTEPTQRMTITEFM
Template Known Secondary structure  TTT

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   303......310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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