Return to main results Retrieve Phyre Job Id

Job DescriptionQ64434
Confidence99.58%DateWed Jul 10 14:13:37 BST 2013
Rank436Aligned Residues88
% Identity19%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  GPKYVGLWDFKARTDEELSFQAGDLLHVTKKEELWWWATLLDAEGKALAEGYVPHNYLAE
Query Conservation      

          

    

   
       
              
 

 


  
Alig confidence 









































..















Template Conservation    

 




 
    


   

 
 

      
      ..   
  
 

 



 
Template Sequence  PLFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPI. . NRLGGPGLVPVSYVRI
Template Known Secondary structure 


S
B


STT


B
TT
TTTS..SS
S



GGG
Template Predicted Secondary structure 


















..




Template SS confidence 



























































   1........10.........20.........30.........40.. .......50........
 
   70.........80.........90.........
Predicted Secondary structure 



















Query SS confidence 





























Query Sequence  KETVESEPWFFGCISRSEAMHRLQAEDNSK
Query Conservation     
    

 
 
 
  

  
       
Alig confidence 





























Template Conservation                               
Template Sequence  IDLMDPAKYASVDTYDREQVMKIIDEFKIP
Template Known Secondary structure 
SS
TTTSSSS
TTSTT

Template Predicted Secondary structure 




























Template SS confidence 





























   58.60.........70.........80.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D