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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank165Aligned Residues240
% Identity23%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210..... ....220........ .230.........240.
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWKGQVH. VAVKVISRDNLLH. . . . . . QHTFQAEIQAMKK
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK
Template Known Secondary structure  TTTTTTGGG



TT

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   36...40.........50.........60.........70.........80.........90.....
 
   242. ......250.........260.........270.........280.........290.........
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Query Sequence  LR. . HKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEG
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Template Sequence  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEA
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SSS
SB


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   96...100.........110.........120.........130........ .140.........150....
 
   300.........310.........320. ........330.........340.........350........
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Query Sequence  MCYLESQNYIHRDLAARNVLVT. ENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEA
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Template Sequence  VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT. . RVYSPPEW
Template Known Secondary structure  TT



SGGGTTTT


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   155....160.........170.........180.........190.........200.... .....210..
 
   359360... ......370.........380.........390.........400.........410.......
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Query Sequence  LSRGH. YSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIH
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Template Sequence  IRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSECQ
Template Known Secondary structure  S
B
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   213......220.........230....... ..240....... ..250.........260....
 
   418.420.........430.........
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Query Sequence  KLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  HLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
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   265....270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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