Job Description Q64434 Confidence 99.88% Date Wed Jul 10 14:13:37 BST 2013 Rank 389 Aligned Residues 125 % Identity 20% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	H	N	Y	L	A	E	K	E	T	V	E	S	E	P	W	F	F	G	C	I	S	R	S	E	A	M	H	R	L	Q	A	E	D	N	S	K	G	A	F	L	I	R	V	S	Q	K	P	G	A	D	Y	V	L	S	V	R	D
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	.	.	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R
Template Known Secondary structure		S							T	T								T	T															T	.	.	T			T	T								S	S	T	T		S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.
Predicted Secondary structure																									.	.	.	.																							.	.
Query SS confidence																									.	.	.	.																							.	.
Query Sequence		A	Q	A	V	R	H	Y	R	I	W	K	N	N	E	G	R	L	H	L	N	E	A	V	.	.	.	.	S	F	S	N	L	S	E	L	V	D	Y	H	K	T	Q	S	L	S	H	G	L	Q	.	.	L	S	M	P	C	W	K	H	K
Query Conservation																									.	.	.	.																							.	.
Alig confidence											.														.	.	.	.																							.	.
Template Conservation											.
Template Sequence		Y	S	R	S	L	H	A	R	I	.	E	Q	W	N	H	N	F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F
Template Known Secondary structure		T	T								.				T	T				S		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure											.
Template SS confidence
		327	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	P	L	P	H	W	D	D	W	E	R	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	S	L	Q	H	I	C	R	T	V	I	C	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D