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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank313Aligned Residues192
% Identity24%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260.........270.........280.........290...
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Query Sequence  AEIQAMKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFA
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . . MSDAFELL. GKNTFEFLKENNFQPYPLPHVRHMA
Template Known Secondary structure  T


B

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B


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BTTTT



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   200.........210...... ...220.... .....230.........240.........
 
   294.....300.........310.........320... ......330.........
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Query Sequence  SQVAEGMCYLESQNYIHRDLAARNVLVTEN. . . . . . . . . . . . . . NLCKVGDFGLARLVKE
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Template Sequence  YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHE
Template Known Secondary structure  TTT




GGG

B


B



GGG
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   265....270.........280.........290.........300.........310.........320....
 
   340.........350.........360.........370.........380.........390.........
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Query Sequence  DIYLSHEHNVPYKWTAPEALSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLR
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Template Sequence  HHTTIVAT. . . RHYRPPEVILELGWAQPCDVWSIGCILFEYYR. GFTLFQTHENREHLVM
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SS
S
...GGG

TT


ST.SS
S


SS
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   330....... ..340.........350.........360......... 370.........380.....
 
   400.. .......410......
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Query Sequence  VDA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYRMPCPLECPPNI
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Template Sequence  MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL
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S
GGGTT


TTS


GGGG
S

S
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   386...390.........400.........410.........420.........430.........440.....
 
   417..420.........430.........
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Query Sequence  HKLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  FDLMRRMLEFDPAQRITLAEALL
Template Known Secondary structure  T
S
TTTS

T
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   446...450.........460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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