Return to main results Retrieve Phyre Job Id

Job DescriptionQ64434
Confidence99.57%DateWed Jul 10 14:13:37 BST 2013
Rank441Aligned Residues68
% Identity24%Templatec2ct4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: solution strutcure of the sh3 domain of the cdc42-2 interacting protein 4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  DKAHLGPKYVGLWDFKARTDEELSFQAGDLLHVTKKEELWWWATLLDAEGKALAEGYVPH
Query Conservation           

          

    

   
       
              
 

 
Alig confidence 
















































...







Template Conservation 
         


 
 
    


   

 
 
        
       ...
  
 

 
Template Sequence  SSGSSGGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKE. . . GGEGYVPT
Template Known Secondary structure 



SS
SS
B


STT


B
TT


SSS

SS...S
G
Template Predicted Secondary structure 

























...


Template SS confidence 



























































   2.......10.........20.........30.........40.........50 ........
 
   65....70.....
Predicted Secondary structure 








Query SS confidence 










Query Sequence  NYLAEKETVES
Query Conservation 


     
  
Alig confidence 










Template Conservation   

       
Template Sequence  SYLRVTSGPSS
Template Known Secondary structure  GG



S
Template Predicted Secondary structure 






Template SS confidence 










   5960.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D