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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank82Aligned Residues237
% Identity28%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210 .........220.. .......230........
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Query Sequence  DWERPREEFTLCKKLGAGYFGEVFEALW. KGQVHVAVKVIS. . . RDNLLHQHTFQAEIQA
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI
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G..GG
SSTTT

TT
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   127..130 .........140.........150.........160.........170.........180....
 
   239240.........250.........260.........270.........280.........290........
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Query Sequence  MKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAE
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Template Sequence  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL. . SKFDEQRTATYITELAN
Template Known Secondary structure  TT


TTB


SS


TT
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   185....190.........200.........210.........220..... ....230.........240..
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  GMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEA
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Template Sequence  ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . . . . . . . . . . . VTLDYLPPEM
Template Known Secondary structure  TTT




GGG
TTS

S

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GGG

GGG
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   243......250.........260.........270........ .280........
 
   359360.........370.........380.........390.........400.........410........
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Query Sequence  LSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHK
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Template Sequence  IEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARD
Template Known Secondary structure  TTTTSSGGG.SS
TT

SSTT
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   301........310.........320.... .....330.........340..... ....350........
 
   419420.........430.........
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Query Sequence  LMLSCWSRDPKQRPCFKDLCE
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Template Sequence  LISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   359360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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