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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank115Aligned Residues248
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210. ........220.........230 .........240....
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Query Sequence  REEFTLCKKLGAGYFGEVFEALWK. GQVHVAVKVISRDNLLHQH. . TFQAEIQAMKKLRH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........
 
   245....250.........260.........270.........280.........290.........300....
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Query Sequence  KHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLE
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR. . EFYSEADASHCIQQILESIAYCH
Template Known Secondary structure  TTB


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S
BTT
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   70.........80.........90.........100.... .....110.........120.......
 
   305....310.........320. ........330.........340.........350.........360.
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Query Sequence  SQNYIHRDLAARNVLVT. . . ENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSR
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Template Sequence  SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG. TPGYLSPEVLKK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

B


S
S.
GGG

T
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   128.130.........140.........150.........160.........170.... .....180......
 
   362.......370.........380.........390.........400......... 410........
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Query Sequence  GHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCP. . . LECPPNIHK
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Template Sequence  DPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
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B
T.SS
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   188.190.........200........ .210.........220.........230.........240......
 
   419420.........430.........
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Query Sequence  LMLSCWSRDPKQRPCFKDLCE
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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