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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank254Aligned Residues242
% Identity21%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190...... ...200.........210.. .......220.........230.........240.. ...
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Query Sequence  EEFTLCKK. LGAGYFGEVFEALWKG. QVHVAVKVISRDNLLHQHTFQAEIQAMKKL. RHK
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140
 
   246...250.........260.........270.........280.........290.........300.....
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Query Sequence  HILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLES
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Template Sequence  NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR. . RHFNELEASVVVQDVASALDFLHN
Template Known Secondary structure  TB


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   141........150.........160.........170.... .....180.........190........
 
   306...310.........320.........330.........340.........350.........360.....
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Query Sequence  QNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHYS
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Template Sequence  KGIAHRDLKPENILCEHPNQVSPVKICDFGPCGSAEYM. . . . . . APEVVEAFSEEASIYD
Template Known Secondary structure  TT


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GGG
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   199200.........210.........220.........230...... ...240.........250..
 
   366...370.........380.........390.. .......400......... 410.
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Query Sequence  IKSDVWSFGVLLHEIFSRGQMPYPGMS. . . . . . . . . . . NHETFLRVDAGYRMPCP. . . LE
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Template Sequence  KRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  T.SS
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   274.....280.........290 .........300.........310.........320.........330..
 
   412.......420.........430.........
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Query Sequence  CPPNIHKLMLSCWSRDPKQRPCFKDLCE
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Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
S
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   337..340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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