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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank147Aligned Residues249
% Identity21%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.. .......220... ......230.........240.
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Query Sequence  RPREEFTLCKKLGAGYFGEVFEALWKG. QVHVAVKVISR. . . DNLLHQHTFQAEIQAMKK
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
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GGG

STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   242.......250.........260.........270.........280.........290.........300
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Query Sequence  . LRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330........ .340.........350.......
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  CYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALS
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSFCG. TPNYIAPEILR
Template Known Secondary structure  TT
B




GGG
TTS



TT
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TT

B


S.
GGG

T
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   358.360.........370.........380.........390.........400..... ....410......
 
   361........370.........380.........390.........400.........410.........420
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Query Sequence  RGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLM
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Template Sequence  GEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVKAASVL
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   418.420.........430......... 440.........450........ .460.........470.....
 
   421........430... ......
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Query Sequence  LSCWSRDPKQRPC. . . . . . FKDLCE
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Template Sequence  KSFLNKDPKERLGCLPQTGFADIQG
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SSSTTSTTTSTTT
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   485....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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