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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank92Aligned Residues250
% Identity36%Templatec1xkkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:epidermal growth factor receptor; PDBTitle: egfr kinase domain complexed with a quinazoline inhibitor-2 gw572016
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210 .........220.........230.........240....
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Query Sequence  RPREEFTLCKKLGAGYFGEVFEALW. KGQVHVAVKVISRDNLLHQHTFQAEIQAMKKLRH
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Template Sequence  LKETEFKKIKVLGSGAFGTVYKGLWIPVKIPVAIKELREKAN. . . KEILDEAYVMASVDN
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   707..710.........720.........730.........740........ .750.........760...
 
   245....250.........260.........270.........280.........290.........300....
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Query Sequence  KHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLE
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Template Sequence  PHVCRLLGICLTST. VQLITQLMPFGCLLDYVREHKDN. IGSQYLLNWCVQIAKGMNYLE
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SSS.

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   772.......780..... ....790.........800........ .810.........820.........
 
   305....310.........320.........330.........340.........350.........360....
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Query Sequence  SQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEALSRGHY
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Template Sequence  DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE. . . . . . KVPIKWMALESILHRIY
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   830.........840.........850.........860...... ...870.........880...
 
   365....370.........380.........390.........400.........410.........420....
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Query Sequence  SIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLMLSCW
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Template Sequence  THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW
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   892.......900.........910.........920.........930.........940.........950.
 
   425....430.........440......
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Query Sequence  SRDPKQRPCFKDLCEKLTGITR
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Template Sequence  MIDADSRPKFRELIIEFSKMAR
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   952.......960.........970...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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