Job Description Q64434 Confidence 100.00% Date Wed Jul 10 14:13:37 BST 2013 Rank 235 Aligned Residues 238 % Identity 23% Template c1ua2A_ PDB info PDB header:cell cycle, transferase Chain: A: PDB Molecule:cell division protein kinase 7; PDBTitle: crystal structure of human cdk7 Resolution 3.02 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		T	L	C	K	K	L	G	A	G	Y	F	G	E	V	F	E	A	L	W	K	.	G	Q	V	H	V	A	V	K	V	I	S	R	D	N	L	L	H	Q	H	T	F	Q	A	E	I	Q	A	M	K	K	L	R	H	K	H	I	L	S	L
Query Conservation																						.
Alig confidence																						.												.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		E	K	L	D	F	L	G	E	G	Q	F	A	T	V	Y	K	A	R	D	K	N	T	N	Q	I	V	A	I	K	K	I	N	.	.	.	.	.	.	.	R	T	A	L	R	E	I	K	L	L	Q	E	L	S	H	P	N	I	I	G	L
Template Known Secondary structure											T	T									S	S			S									.	.	.	.	.	.	.	T															T	T	B
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	V	A	T	A	G	D	P	V	Y	I	I	T	E	L	M	P	K	G	N	L	L	Q	L	L	R	D	S	D	E	K	A	L	P	I	L	E	L	V	D	F	A	S	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		L	D	A	F	G	H	K	S	N	I	S	L	V	F	D	F	M	E	T	D	L	E	V	I	I	K	D	N	S	.	.	L	V	L	T	P	S	H	I	K	A	Y	M	L	M	T	L	Q	G	L	E	Y	L	H	Q	H	W	I	L	H
Template Known Secondary structure								T	T										S								T	T			.	.	S	S			S	S																			T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	A	A	R	N	V	L	V	T	E	N	N	L	C	K	V	G	D	F	G	L	A	R	L	V	K	E	D	I	Y	L	S	H	E	H	N	V	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	I	K	S	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	L	K	P	N	N	L	L	L	D	E	N	G	V	L	K	L	A	D	F	G	L	A	K	S	F	G	S	P	N	R	A	Y	H	Q	V	V	T	R	W	Y	R	A	P	E	L	L	F	G	A	R	M	Y	G	V	G	V	D	M
Template Known Secondary structure						G	G	G					T	T									G	G	G	S	T	T	T	S												T	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	S	F	G	V	L	L	H	E	I	F	S	R	G	Q	M	P	Y	P	G	M	S	N	H	E	T	F	L	R	V	D	A	G	Y	R	M	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		W	A	V	G	C	I	L	A	E	L	L	L	.	R	V	P	F	L	P	G	D	S	D	L	D	Q	L	T	R	I	F	E	T	L	G	T	P	T	E	E	Q	W	P	D	M	C	S	L	P	D	Y	V	T	F	K	S	F	P	G	I
Template Known Secondary structure														.	S	S		S	S			S	S																	T	T	T	S	S	S	T	T	S	S	T	T
Template Predicted Secondary structure														.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
							409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	P	L	E	C	P	P	N	I	H	K	L	M	L	S	C	W	S	R	D	P	K	Q	R	P	C	F	K	D	L	C	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		P	L	H	H	I	F	S	A	A	G	D	D	L	L	D	L	I	Q	G	L	F	L	F	N	P	C	A	R	I	T	A	T	Q	A	L	K
Template Known Secondary structure								T	T															S	S	T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D