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Job DescriptionQ64434
Confidence100.00%DateWed Jul 10 14:13:37 BST 2013
Rank295Aligned Residues239
% Identity31%Templatec1jnkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:c-jun n-terminal kinase; PDBTitle: the c-jun n-terminal kinase (jnk3s) complexed with mgamp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210..... ....220.... .....230.........240.....
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Query Sequence  EEFTLCKKLGAGYFGEVFEALWKGQVH. VAVKVISRD. . NLLHQHTFQAEIQAMKKLRHK
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Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK
Template Known Secondary structure  TT
SSTTTTSGGGS


T
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   62.......70.........80.........90.........100.........110.........120.
 
   246...250....... ..260.........270.........280.........290.........
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Query Sequence  HILSLYAVATAG. . . . . . DPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEG
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Template Sequence  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ. . . . . MELDHERMSYLLYQMLCG
Template Known Secondary structure  TB


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STTT



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   122.......130.........140.........150........ .160.........170......
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  MCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVPYKWTAPEAL
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Template Sequence  IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLASFMMTPY. . . . . . VVTRYYRAPEVI
Template Known Secondary structure  TT






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TT

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   177..180.........190.........200.........210........ .220.........230
 
   360.........370.........380.........390.........400.........
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Query Sequence  SRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCP. . . . . . . . . .
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Template Sequence  LGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV
Template Known Secondary structure  TT



TT.SS
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   236...240.........250........ .260.........270.........280.........290....
 
   410.........420.........430........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LECPPNIHKLMLSCWSRDPKQRPCFKDLC
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Template Sequence  RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL
Template Known Secondary structure  TS






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   295....300.........310.........320.........330.........340.........350....
 
   439
Predicted Secondary structure 
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Query Sequence  E
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Q
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   355
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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