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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank121Aligned Residues250
% Identity39%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420..... ....430........ .440........
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Query Sequence  IDPKDLTFLKELGTGQFGVVKYGKWRGQY. . . . DVAIKMIREGSMS. . . . EDEFIEEAKV
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
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GGG



B

TTS
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S
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   121........130.........140.........150.........160.........170.........180
 
   449450.........460.........470.........480.........490.........500........
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Query Sequence  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA
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Template Sequence  MHSLDHRNLIRLYGVVLTPPM. KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG
Template Known Secondary structure  T


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   181........190.........200. ........210.........220.........230.........
 
   509510.........520.........530.........540.........550.........560........
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Query Sequence  MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV
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Template Sequence  MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCAPES
Template Known Secondary structure  TT


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SGGGSSSS


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   240.........250.........260.........270.... .....280........
 
   569570.........580.........590.........600.........610.. .......620.......
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Query Sequence  LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ. GLRLYRPHLASERVY
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Template Sequence  LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY
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TTT

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   302.......310.........320.........330.........340.........350.........360.
 
   628.630.........640.........650........
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Query Sequence  TIMYSCWHEKADERPSFKILLSNILDVMDEE
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Template Sequence  NVMVQCWAHKPEDRPTFVALRDFLLEAQPTD
Template Known Secondary structure  T
SSGGGS

T


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   362.......370.........380.........390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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