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Job DescriptionP35991
Confidence99.44%DateWed Jul 10 14:27:18 BST 2013
Rank490Aligned Residues98
% Identity21%Templatec4h8sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  AAVILESIFLKRSQQKKKTSPLNFKKRLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKI
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Template Sequence  NLIQKAGYLNLR. . NKTGLVTTTWERLYFFTQGGNLMCQ. . . . . PRGAVAGGLIQDLDN.
Template Known Secondary structure  S
S

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B
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   276...280....... ..290.........300.........310.. .......320.......
 
   62.......70.........80.........90.........100........ .110.........
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Query Sequence  TCVETVIPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDE. . GPLYVFSPTEE
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Template Sequence  CSVMAVDCE. . . . . . . . . . . . . . . . . . . . . . . . . . DRRYCFQITTPNGKSGIILQAESRK
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T..........................T
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   328.330...... ...340.........350.........360.
 
   120.........130...
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Query Sequence  LRKRWIHQLKNVIR
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Template Conservation      
   
     
Template Sequence  ENEEWICAINNISR
Template Known Secondary structure  S
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   362.......370.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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