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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank224Aligned Residues231
% Identity24%Templatec4g34A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crystal structure of gsk6924 bound to perk (r587-r1092, delete a660-2 t867) at 2.70 a resolution
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.. .......430... ......440.........450......
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Query Sequence  KDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIR. . EGSMSEDEFIEEAKVMMNLSHEK
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Template Sequence  TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG
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   590.........600.........610.........620.........630.........640.........
 
   457..460........ .470.........480......... 490.........500.........510..
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Query Sequence  LVQLYGVCTKQR. . PIFIITEYMANGCLLNYLREM. . RHRFQTQQLLEMCKDVCEAMEYL
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Template Sequence  IVRYFNAWLEKNKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL
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   650.........660.........670.........680.........690.........700.........
 
   513......520.........530.........540.........550.........560.........570..
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Query Sequence  ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS
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Template Sequence  HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLGTKL. . . . . . . . . . . . . . . . YMSPEQIHGN
Template Known Secondary structure  TT






GGG
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   928.930.........940.........950.........960. ........970.
 
   573......580.........590.........600.........610.........620.........630..
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Query Sequence  KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVYTIMYS
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Template Sequence  SYSHKVDIFSLGLILFELLY. P. . FSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQD
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   9991000.........1010........ . 1020.........1030.........1040.........1050.....
 
   633......640.........
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Query Sequence  CWHEKADERPSFKILLS
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Template Sequence  MLSPSPMERPEAINIIE
Template Known Secondary structure  T
SSGGGS

T
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   1056...1060.........1070..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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