Return to main results Retrieve Phyre Job Id

Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank113Aligned Residues242
% Identity18%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.. .......430........ .440.........450.....
Predicted Secondary structure 



.








....



Query SS confidence 





















.















. . . .
















Query Sequence  DLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMS. . . . EDEFIEEAKVMMNLSHE
Query Conservation         

 
 

 
      .    



        ....   
  
   
  
 
 
Alig confidence 





















.















....
















Template Conservation   
 
   

 
  
 

 
        



 
                
   
  
 

Template Sequence  RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ
Template Known Secondary structure  TTTTTT



SS

TT


T
Template Predicted Secondary structure 














Template SS confidence 



























































   910.........20.........30.........40.........50.........60........
 
   456...460.........470.........480.........490.........500.........510.....
Predicted Secondary structure 















Query SS confidence 



























































Query Sequence  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK
Query Conservation 


 
 
         

 
    


   
      
       
  


 

 


  
Alig confidence 


































.























Template Conservation 


             

 
   
  
        .                        
Template Sequence  NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG. PLSVDTAINFTNQILDGIKHAHDM
Template Known Secondary structure  TB



TT


S
BS
.S

SST
Template Predicted Secondary structure 































.



Template SS confidence 



























































   6970.........80.........90.........100... ......110.........120.......
 
   516...520.........530.........540.........550.........560.........570.....
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS
Query Conservation   





   



     


 




                
  
 


       
Alig confidence 



























...............
















Template Conservation                         
    ...............    
 


        
Template Sequence  RIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . . . . . . . KTVQYFSPEQAKGEATD
Template Known Secondary structure  T






GGG
TT







...............

GGG

T



Template Predicted Secondary structure 






















...............













Template SS confidence 



























































   128.130.........140.........150..... ....160.........170..
 
   576...580.........590.........600.........610....... ..620.........630.
Predicted Secondary structure 















....





Query SS confidence 









































. . . .













Query Sequence  SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY. . . . RPHLASERVYTIMY
Query Conservation   





 

 
 

 
 
  
            
  
    .... 
   
  
  

 
Alig confidence 
















.























....













Template Conservation     

 


 

 



.
  

                               
  

 
Template Sequence  ECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL
Template Known Secondary structure  T.SS
S


SSTTTS



S
TTS
TT
Template Predicted Secondary structure 


.




















Template SS confidence 



























































   188.190.........200.... .....210.........220.........230.........240......
 
   632.......640. ........650.........
Predicted Secondary structure 




.



Query SS confidence 









.

















Query Sequence  SCWHEKADER. PSFKILLSNILDVMDEES
Query Conservation   

  

  
.

   
   
        
Alig confidence 









.

















Template Conservation    
  

  
  
  

   
        
Template Sequence  RATEKDKANRYKTIQEMKDDLSSVLHENR
Template Known Secondary structure  T
SSTTTS
SSTT
SS
Template Predicted Secondary structure 



Template SS confidence 




























   247..250.........260.........270.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D