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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank263Aligned Residues244
% Identity20%Templatec4accB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: gsk3b in complex with inhibitor
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.. .......430.........440.........450.........
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Query Sequence  DLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHEKLVQ
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Template Sequence  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF. . . KNRELQIMRKLDHCNIVR
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   55....60.........70.........80.........90... ......100.........110.
 
   460......... 470.........480......... 490.........500.........510.
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Query Sequence  LYGVCTKQRP. . . . . . IFIITEYMANGCLLNYLREM. . RHRFQTQQLLEMCKDVCEAMEY
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Template Sequence  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY
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   112.......120.........130.........140.........150.........160.........170.
 
   512.......520.........530. ........540.........550.........560.........570
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Query Sequence  LESKQFLHRDLAARNCLVND. QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM
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Template Sequence  IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY. RAPELIFG
Template Known Secondary structure  TTT
S

SGGG
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S
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TT
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   172.......180.........190.........200.........210.........220.. .......230
 
   571........580.........590.........600.........610........
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Query Sequence  YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR. . . . . . . . . . . .
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Template Sequence  ATDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT
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   231........240.........250.. .......260.........270.........280.........
 
   619620.........630.........640.........
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Query Sequence  . . . . . . . . . . . . . . . . PHLASERVYTIMYSCWHEKADERPSFKILLS
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Template Sequence  EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA
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   290.........300.........310.........320.........330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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