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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank208Aligned Residues235
% Identity21%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.. .......430.........440.........450.....
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Query Sequence  IDPKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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   16...20.........30.........40.........50.........60.........70.....
 
   456...460.........470.........480.........490.........500.........510.....
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Query Sequence  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG. RFSEDEARFFFQQLISGVSYAHAM
Template Known Secondary structure  TB


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   76...80.........90.........100.........110 .........120.........130....
 
   516...520.........530.. .......540.........550.........560.........570...
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Query Sequence  QFLHRDLAARNCLVNDQ. . GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK
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Template Sequence  QVAHRDLKLENTLLDGSPAPRLKIADFGYTP. . . . . . . . . . . . . . . . AYIAPEVLLKKEY
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GGG


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   135....140.........150.........160..... ....170........
 
   574.....580.........590.........600.........610... ......620........
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Query Sequence  FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG. . . . . LRLYRPHLASERVYT
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Template Sequence  DGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH
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   194.....200.........210.. .......220.........230.........240.........250..
 
   629630.........640.........
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Query Sequence  IMYSCWHEKADERPSFKILLS
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Template Sequence  LISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
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   253......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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