Job Description P35991 Confidence 99.48% Date Wed Jul 10 14:27:18 BST 2013 Rank 484 Aligned Residues 110 % Identity 18% Template c3tcaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the ras-associating and pleckstrin-homology2 domains of riam Resolution 2.35 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	S	I	F	L	K	R	S	Q	Q	K	K	K	T	S	P	L	N	F	K	K	R	L	F	L	L	T	V	H	K	L	S	Y	Y	E	Y	D	F	E	R	G	R	R	G	S	K	K	G	S	I	D	V	E	K	I	T	C	V	E
Query Conservation
Alig confidence																.	.	.	.	.																									.
Template Conservation																.	.	.	.	.																									.
Template Sequence		L	E	G	A	L	Y	L	K	E	D	G	K	K	S	.	.	.	.	.	W	K	R	R	Y	F	L	L	R	A	S	G	I	Y	Y	V	P	K	G	K	T	K	T	S	.	R	D	L	A	C	F	I	Q	F	E	N	V	N	I	Y	Y
Template Known Secondary structure											T	T	S	S		.	.	.	.	.										S	S							T	T			S	S	T	.	T	T							G	G	G
Template Predicted Secondary structure																.	.	.	.	.																									.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		T	V	I	P	E	K	N	P	P	P	E	R	Q	I	P	R	R	G	E	E	S	S	E	M	E	Q	I	S	I	I	E	R	F	P	Y	P	F	Q	V	V	Y	D	E	G	P	.	.	.	.	.	.	L	Y	V	F	S	P	T	E	E
Query Conservation																																															.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	Q	C	K	M	K	Y	K	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	H	C	F	V	L	K	H	P	Q	I	Q	K	E	S	Q	Y	I	K	Y	L	C	C	D	D	A	R
Template Known Secondary structure				S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T			S			T	T	S						S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380																						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	R	W	I	H	Q	L	K	N	V	I	R	Y	N	S	D	L	V	Q	K	Y	H
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		T	L	S	Q	W	V	M	G	I	R	.	I	A	K	Y	G	K	T	L	Y	D	N	Y	Q
Template Known Secondary structure												.					T
Template Predicted Secondary structure												.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D