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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank50Aligned Residues238
% Identity23%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405....410.........420. ........430.........440.........450.........460...
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Query Sequence  LKELGTGQFGVVKYGKW. RGQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHEKLVQLYGV
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Template Sequence  FKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDV
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   58.60.........70.........80.........90 .........100.........110.....
 
   464.....470.........480.........490.........500.........510.........520...
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Query Sequence  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA
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Template Sequence  FEDKKYFYLVTEFYEGGELFEQIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDIK
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   134.....140.........150.........160 .........170.........180.........190..
 
   524..... 530.........540.........550.........560.........570.........580
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Query Sequence  ARNCLV. . . NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI
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Template Sequence  PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT. . AYYIAPEVLKK. KYNEKCDV
Template Known Secondary structure  GGGSSTT

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   193......200.........210.........220.........230 .........240. ........
 
   581........590.........600.........610.........620 .........630.......
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Query Sequence  WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH. . . LASERVYTIMYSCWHEK
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Template Sequence  WSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD
Template Known Secondary structure  .SS
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   250.........260. ........270.........280.........290.........300........
 
   638.640.........
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Query Sequence  ADERPSFKILLS
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Template Sequence  YNKRCTAEEALN
Template Known Secondary structure  TTTS

T
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   309310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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