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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank22Aligned Residues276
% Identity22%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390.........400.........410.........420.. ....
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Query Sequence  GLISRLKYPVSKQNKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR. GQYD
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Template Sequence  GISELQKAGVDGWFKLLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDEL
Template Known Secondary structure  BTT


B
TTGGGT





TTSSBTTTB
SSS

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   262.......270.........280.........290.........300.........310.........320.
 
   427..430...... ...440.........450.. .......460.........470.........480.
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Query Sequence  VAIKMIREGS. . . . MSEDEFIEEAKVMMNL. SHEKLVQLYGVCTKQRPIFIITEYMANGC
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Template Sequence  YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD
Template Known Secondary structure  TTTTT
TT

TTB



B
SS


S
B
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   368.370.........380.........390.........400.........410.........420.......
 
   482.......490.........500.........510.........520.........530.........540.
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Query Sequence  LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG
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Template Sequence  LMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG
Template Known Secondary structure  S.S

TS




STT
SSS



T
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   428.430...... ...440.........450.........460.........470.........480......
 
   542.......550.........560.........570.........580.........590.........600.
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Query Sequence  LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF
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Template Sequence  MCKENIWDGVTTKF. . CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGE
Template Known Secondary structure  T



TT

B

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S
SSS

T


BST.SS
SS

S
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   487..490.........500 .........510.........520.........530..... ....540...
 
   602.......610.........620.........630.........640.... ....
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Query Sequence  TNSETAEHIAQGLRLYRPHLASERVYTIMYSCWHEKADERPSF. . . . . KILL
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Template Sequence  DEDELFQSIME. HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK
Template Known Secondary structure  SS.S




TTS
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SSSTT
TT
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   545....550..... ....560.........570.........580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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