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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank86Aligned Residues238
% Identity20%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410..... ....420.........430.........440.........450.. ..
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Query Sequence  IDPKDLTFLKELGTGQFGV. VKYGKWRGQYDVAIKMIREGSMSEDEFIEEAKVMMNL. SH
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMF. DNRDVAVKRILPECFSF. . ADREVQLLRESDEH
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B
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   566...570.........580.........590. ........600........ .610.........620..
 
   455....460.........470.........480.........490.........500.........510....
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Query Sequence  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES
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Template Sequence  PNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS
Template Known Secondary structure  TTB


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   623......630.........640...... ...650.........660.........670.........680.
 
   515....520.........530.... .....540.........550.........560.........
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Query Sequence  KQFLHRDLAARNCLVNDQGV. . . . . VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL
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Template Sequence  LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK. . . . . . . . . . KLAPGTEGWIAPEML
Template Known Secondary structure  TT





SGGG


BTTTB




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GGGG
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   682.......690.........700.........710...... ...720.........730.
 
   570.........580.........590.........600.........610... ......620.......
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Query Sequence  MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG. . LRLYRPHLASERVY
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Template Sequence  SEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAR
Template Known Secondary structure  T




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   744.....750.........760.........770.........780.........790.........800...
 
   628.630.........640........
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Query Sequence  TIMYSCWHEKADERPSFKILL
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Template Sequence  ELIEKMIAMDPQKRPSAKHVL
Template Known Secondary structure  T
SSGGG


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   807..810.........820.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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