Job Description P35991 Confidence 99.48% Date Wed Jul 10 14:27:18 BST 2013 Rank 486 Aligned Residues 79 % Identity 16% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Y	E	W	Y	S	K	H	M	T	R	S	Q	A	E	Q	L	L	K	Q	E	G	K	E	G	G	F	I	V	R	D	S	S	K	.	A	G	K	Y	T	V	S	V	F	A	K	S	T	G	E	P	Q	G	V	I	R	H	Y	V	V	C
Query Conservation																																			.
Alig confidence							.																.												.												.	.	.	.	.
Template Conservation							.																.																								.	.	.	.	.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	.	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	.	.	.	.	.	K	D	L	F	Q	H	V	D	I	Q
Template Known Secondary structure			T	T			.												T	T	S		.	T	T								S	S		T	T										.	.	.	.	.	T	T
Template Predicted Secondary structure							.																.																								.	.	.	.	.
Template SS confidence
		6	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.
		338	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		S	T	P	Q	.	.	.	.	.	.	S	Q	Y	Y	L	A	E	K	H	L	F	S	T	I	P	E	L	I	N	Y	H	Q	H
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure				S		S	S	T	T	S			S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D